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Table 4 Defense-related candidate genes classified in the co-expression subcluster K03

From: Identification of the defense-related gene VdWRKY53 from the wild grapevine Vitis davidii using RNA sequencing and ectopic expression analysis in Arabidopsis

Gene ID Gene function   RPKM value
VIV1 DA1 VIV2 DA2 VIV3 DA3
VIT_18s0041g00020 Wall-associated receptor kinase 2 9.69 22.35 13.35 16.12 10.79 76.36
VIT_18s0001g11620 Wall-associated receptor kinase 2 0.42 5.24 2.48 19.85 0.60 1.52
VIT_12s0035g00070 LRR receptor-like serine/ threonine-protein kinase 1.55 16.89 2.86 53.64 1.57 54.97
VIT_12s0055g00580 LRR receptor-like serine/threonine-protein kinase 1.35 5.42 2.55 24.08 1.84 5.52
VIT_12s0035g00180 LRR receptor-like serine/threonine-protein kinase 0.75 1.25 0.81 33.93 1.07 2.52
Vitis_vinifera_newGene_4892 LRR receptor-like serine/threonine-protein kinase 0.90 1.79 0.24 8.41 0.05 1.22
Vitis_vinifera_newGene_4928 LRR receptor-like serine/threonine-protein kinase 1.67 10.70 11.78 27.30 0.12 5.41
VIT_07s0005g02570 WRKY transcription factor 20.39 34.65 128.83 186.78 26.54 36.92
VIT_16s0050g02510 WRKY transcription factor 15.66 21.43 36.74 103.31 23.85 24.72
VIT_07s0005g01710 WRKY transcription factor 6.56 6.81 7.35 20.64 3.61 3.84
VIT_01s0010g03930 WRKY transcription factor 4.07 22.10 32.43 96.59 5.71 21.80
VIT_17s0000g01280 WRKY transcription factor 0.31 2.62 3.68 10.42 0.44 9.98
VIT_19s0090g00840 WRKY transcription factor 0.44 9.93 4.63 68.05 0.30 2.17
VIT_10s0003g02810 WRKY transcription factor 1.37 25.96 3.77 27.71 1.47 4.30
VIT_01s0026g01730 WRKY transcription factor 1.72 5.47 14.58 27.03 2.9 2.76
VIT_05s0077g00730 WRKY transcription factor 13.33 75.25 26.90 109.90 7.25 22.38
VIT_10s0003g01600 WRKY transcription factor 11.80 47.38 76.53 104.56 17.11 46.80
VIT_02s0025g00420 WRKY transcription factor 0.19 0.46 2.59 13.44 0.62 1.64
VIT_11s0052g01620 Pathogenesis-related protein PR-1 2.35 0.97 0.91 18.12 3.85 7.39
VIT_14s0081g00020 Pathogenesis-related protein PR-1 5.25 17.21 4.56 69.54 0.86 4.87