Skip to main content

Table 4 Defense-related candidate genes classified in the co-expression subcluster K03

From: Identification of the defense-related gene VdWRKY53 from the wild grapevine Vitis davidii using RNA sequencing and ectopic expression analysis in Arabidopsis

Gene ID

Gene function

 

RPKM value

VIV1

DA1

VIV2

DA2

VIV3

DA3

VIT_18s0041g00020

Wall-associated receptor kinase 2

9.69

22.35

13.35

16.12

10.79

76.36

VIT_18s0001g11620

Wall-associated receptor kinase 2

0.42

5.24

2.48

19.85

0.60

1.52

VIT_12s0035g00070

LRR receptor-like serine/ threonine-protein kinase

1.55

16.89

2.86

53.64

1.57

54.97

VIT_12s0055g00580

LRR receptor-like serine/threonine-protein kinase

1.35

5.42

2.55

24.08

1.84

5.52

VIT_12s0035g00180

LRR receptor-like serine/threonine-protein kinase

0.75

1.25

0.81

33.93

1.07

2.52

Vitis_vinifera_newGene_4892

LRR receptor-like serine/threonine-protein kinase

0.90

1.79

0.24

8.41

0.05

1.22

Vitis_vinifera_newGene_4928

LRR receptor-like serine/threonine-protein kinase

1.67

10.70

11.78

27.30

0.12

5.41

VIT_07s0005g02570

WRKY transcription factor

20.39

34.65

128.83

186.78

26.54

36.92

VIT_16s0050g02510

WRKY transcription factor

15.66

21.43

36.74

103.31

23.85

24.72

VIT_07s0005g01710

WRKY transcription factor

6.56

6.81

7.35

20.64

3.61

3.84

VIT_01s0010g03930

WRKY transcription factor

4.07

22.10

32.43

96.59

5.71

21.80

VIT_17s0000g01280

WRKY transcription factor

0.31

2.62

3.68

10.42

0.44

9.98

VIT_19s0090g00840

WRKY transcription factor

0.44

9.93

4.63

68.05

0.30

2.17

VIT_10s0003g02810

WRKY transcription factor

1.37

25.96

3.77

27.71

1.47

4.30

VIT_01s0026g01730

WRKY transcription factor

1.72

5.47

14.58

27.03

2.9

2.76

VIT_05s0077g00730

WRKY transcription factor

13.33

75.25

26.90

109.90

7.25

22.38

VIT_10s0003g01600

WRKY transcription factor

11.80

47.38

76.53

104.56

17.11

46.80

VIT_02s0025g00420

WRKY transcription factor

0.19

0.46

2.59

13.44

0.62

1.64

VIT_11s0052g01620

Pathogenesis-related protein PR-1

2.35

0.97

0.91

18.12

3.85

7.39

VIT_14s0081g00020

Pathogenesis-related protein PR-1

5.25

17.21

4.56

69.54

0.86

4.87