Table 2 Summary of RNA-Seq data
From: Global transcriptome analysis of H5N1 influenza virus-infected human cells
Sample | Raw reads | Clean reads | Clean bases | Error rate (%) | Q20 (%) | Q30 (%) | GC content (%) |
|---|---|---|---|---|---|---|---|
A549-8 h | 29,385,754 | 28,948,578 | 4.12G | 0.02 | 96.89 | 89.67 | 52.65 |
A549-8 h | 30,875,826 | 29,048,576 | 4.34G | 0.02 | 95.48 | 89.21 | 52.10 |
A549-8 h | 28,045,738 | 27,746,588 | 4.31G | 0.01 | 97.46 | 91.73 | 52.17 |
A549-0 h | 29,947,344 | 28,298,487 | 4.15G | 0.02 | 97.29 | 90.50 | 52.47 |
A549-0 h | 29,678,857 | 28,875,243 | 4.35G | 0.01 | 96.87 | 89.87 | 52.12 |
A549-0 h | 28,985,085 | 27,856,326 | 4.52G | 0.01 | 96.86 | 91.78 | 52.32 |
293 T-8 h | 27,094,852 | 26,827,590 | 3.97G | 0.01 | 95.38 | 88.84 | 52.55 |
293 T-8 h | 29,947,576 | 27,948,592 | 3.68 g | 0.02 | 96.49 | 89.17 | 52.71 |
293 T-8 h | 26,048,570 | 25,958,796 | 3.86G | 0.01 | 95.82 | 89.84 | 52.62 |
293 T-0 h | 27,406,945 | 26,396,898 | 3.95G | 0.01 | 95.43 | 89.14 | 52.48 |
293 T-0 h | 29,094,048 | 28,194,512 | 3.72G | 0.01 | 95.50 | 89.68 | 52.24 |
293 T-0 h | 28,395,329 | 26,998,396 | 3.84G | 0.02 | 96.93 | 88.98 | 52.61 |