Table 4 The top 10 up-regulated and down-regulated differentially expressed genes in white coat color vs. black coat color
From: Regulatory pathway analysis of coat color genes in Mongolian horses
Gene | Log2 (White FPKM/Black FPKM) | UP/DOWN | Function |
|---|---|---|---|
MHCB3 | 10.379 | up | MHC class I protein complex |
CALCB | 5.537 | up | hormone activity |
CPSF4L | 4.888 | up | metal ion binding |
LOC100057688 | 4.685 | up | protein binding |
UNKNOW | 3.833 | up | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as 1 donor, and incorporation of 1 atom of oxygen |
LOC100054146 | 3.707 | up | nucleosome assembly |
FOSB | 3.674 | up | sequence-specific DNA binding |
CACNB4 | 3.548 | up | protein binding |
UNKNOW | 3.506 | up | protein binding |
CHODL | 3.327 | up | carbohydrate binding |
CPNE6 | −7.670 | down | protein binding |
UNKNOW | −6.393 | down | protein binding |
LOC100629895 | −6.058 | down | mammaglobin-A-like |
UNKNOW | −5.387 | down | protein binding |
C1QTNF6 | −5.038 | down | collagen trimer |
NALCN | −4.743 | down | cation channel activity |
LOC100061216 | −4.383 | down | integral component of membrane |
HBB | −4.327 | down | oxygen transport |
OTOR | −4.318 | down | protein binding |
UNKNOW | −4.229 | down | keratin filament |