| |
L
|
S
|
N
h
|
π (×10−3) |
θ
W (×10−3) |
R
M
|
ρ
| Mean ω
| Tajima’s D
| Fay & Wu’s H
| Wall’s B
| Wall’s Q
| Mean conservation score |
|---|
5’ portion | 872 | 68 | 21 | 19 | 20 | 20 | 0.383 | 0.280 | −0.195 n.s. | 3.355 n.s. | 0.015* | 0.030* | 0.105 |
3’ portion | 761 | 20 | 15 | 4 | 7 | 1 | 0.026 | 0.128 | −1.363 n.s. | −1.768 n.s. | 0.000 n.s. | 0.000 n.s. | −0.121 |
- The table shows the lengths of the 5’ and 3’ portions of the sequence (L), the number of segregating sites (S), the number of haplotypes (N
h), the total nucleotide diversity (π), the total Watterson’s estimator of population mutation rate (per site) (θ
W), the minimum number of recombination events (R
M), the population recombination parameter (ρ) (per site), the average ω ratio, Tajima’s D, Fay & Wu’s H, and Wall’s B and Q, as well as the mean conservation score (the smaller the value, the more conserved) estimated using the online ConSurf Server. Because parts of the coding sequence are not available for the outgroup sequence from F. altissima, the 5’ and 3’ portions of F. ovina PgiC1 that were considered in the Fay and Wu’s H test span, respectively, coding sequence nucleotide positions 259-828 & 919-1530
- *0.01 < P < 0.05; n.s. non-significant
