Table 4 Number of polymorphic loci (NPL) and percentage of polymorphic loci (PPL) for AFLP, number of polymorphic alleles (NPA) and percentage of polymorphic alleles (PPA) for SSR, Nei’s gene diversity (H) and Shannon’s information index (I) for populations of Neonectria ditissima from different orchards based on AFLP with 44 isolates and SSR markers with 28 isolates

NPL

PPL

H

I

Orchards

Balsgård, Sweden

201

51

0.13

0.21

Bjärred, Sweden

88

22

0.10

0.14

Kivik, Sweden

64

16

0.08

0.11

Julita, Sweden

60

15

0.07

0.10

Jonstorp, Sweden

80

20

0.09

0.13

Jönköping, Sweden

42

11

0.05

0.07

Stockholm, Sweden

67

17

0.08

0.12

Gembloux, Belgium

102

26

0.10

0.15

Mean

88

22.2

0.09

0.13

272

69

0.14

0.23

NPA

PPA

H

I

Orchards

Balsgård, Sweden

14

45

0.14

0.22

Bjärred, Sweden

9

29

0.13

0.18

Kivik, Sweden

7

23

0.11

0.16

Julita, Sweden

5

16

0.08

0.11

Jonstorp, Sweden

6

19

0.09

0.12

Jönköping, Sweden

6

19

0.10

0.13

Stockholm, Sweden

3

10

0.05

0.07

Gembloux, Belgium

12

39

0.15

0.22

Mean

7.7

25

0.11

0.15

31

100

0.19

0.32