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Table 3 FAIRE Peak-Gene Overlaps in the M/m Locus. We analyzed the FAIRE peaks in a 2.2 Mb region (1:150716898–152,949,239) in the predicted M/m locus. 10 protein-coding and 36 long-noncoding RNA genes were located in the region. For genes with FAIRE peak overlaps, we listed the gene IDs, names (if known), gene types (protein-coding or long noncoding RNA), whether the transcription start site (2.5 Kbp upstream region) was overlapped by a FAIRE peak, and the number of FAIRE peaks overlapping introns of each gene

From: PeakMatcher facilitates updated Aedes aegypti embryonic cis-regulatory element map

Gene ID

Gene Name

Gene Type

TSS Overlapped

by FAIRE Peaks

Number of Peaks

Overlapping Introns

AAEL020975

 

lncRNA

X

 

AAEL021838

myo-sex

protein

 

8

AAEL022711

 

lncRNA

X

 

AAEL022912

Nix

protein

X

1

AAEL024704

 

lncRNA

X

 

AAEL025015

 

lncRNA

X

 

AAEL026346

 

lncRNA

X

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