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Table 1 Analysis of statistical data RNA-seq of orchardgrass

From: Transcriptome analysis on responses of orchardgrass (Dactylis glomerata L.) leaves to a short term flooding

Samplea WS_0h_1 WS_0h_2 WS_0h_3 WS_8h_1 WS_8h_2 WS_8h_3 WS_24h_1 WS_24h_2 WS_24h_3
Total readsb 44,643,436 51,100,544 41,539,096 48,916,078 46,175,616 39,333,770 39,625,568 48,857,684 56,545,956
Total mapped (%)c 32,213,341 36,722,643 29,484,126 34,653,721 32,228,040 27,919,523 28,219,174 33,577,514 39,533,008
(72.16%) (71.86%) (70.98%) (70.84%) (69.79%) (70.98%) (71.21%) (68.73%) (69.91%)
Multiple mapped (%)d 1,120,609 1,233,315 946,216 1,225,851 1,073,156 899,453 852,050 1,147,239 1,276,249
(2.51%) (2.41%) (2.28%) (2.51%) (2.32%) (2.29%) (2.15%) (2.35%) (2.26%)
Uniquely mapped (%)e 31,092,732 35,489,328 28,537,910 33,427,870 31,154,884 27,020,070 27,367,124 32,430,275 38,256,759
(69.65%) (69.45%) (68.7%) (68.34%) (67.47%) (68.69%) (69.06%) (66.38%) (67.66%)
Reads map to ‘+’ (%)f 15,563,768 17,748,957 14,279,174 16,684,717 15,561,283 13,493,851 13,693,019 16,209,484 19,136,212
(34.86%) (34.73%) (34.38%) (34.11%) (33.7%) (34.31%) (34.56%) (33.18%) (33.84%)
Reads map to ‘-’ (%)g 15,528,964 17,740,371 14,258,736 16,743,153 15,593,601 13,526,219 13,674,105 16,220,791 19,120,547
(34.78%) (34.72%) (34.33%) (34.23%) (33.77%) (34.39%) (34.51%) (33.2%) (33.81%)
  1. aWS_0h_1, 2, 3 (flooding treated for 0 h), WS_8h_1, 2, 3 (flooding treated for 8 h), WS_24h_1, 2, 3 (flooding treated for 24 h); bThe amount of RNA-seq sequencing sequence filtered by sequencing data (Clean data);cTotal Mapped Reads and their percentage of clean reads; dMultiple Mapped Reads and their percentage of clean reads; eUniquely Mapped Reads and their percentage of clean reads; f, gSequencing sequence alignment to the total number of positive and negative strands on the genome (Total Mapped Reads) and its percentage of clean reads