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Table 1 The top 5 of biological processes (BP) terms, Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways, and Reactome pathways for upregulated differentially expressed genes (DEGs)

From: microRNA-9 might be a novel protective factor for osteoarthritis patients

GO_ID

BP term Pathway

GO:0030198

extracellular matrix organization

GO:0009888

tissue development

GO:0045597

positive regulation of cell differentiation,

GO:0007155

cell adhesion

GO:0022610

biological adhesion

KEGG_ID

KEGG Pathway

04350

TGF-beta signaling pathway

04510

Focal adhesion

04142

Lysosome

04512

ECM-receptor interaction

05110

Vibrio cholerae infection

Reactome_ID

Reactome Pathway

1,442,490

Collagen degradation

3,000,170

Syndecan interactions

216,083

Integrin cell surface interactions

1,474,228

Degradation of the extracellular matrix

1,474,244

Extracellular matrix organization