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Table 2 Comparison results between STRScan and CE for 9947A in the Ion S5 dataset

From: STRsearch: a new pipeline for targeted profiling of short tandem repeats in massively parallel sequencing data

MarkerRepeat motif1Alleles (a1, a2)Supporting reads (a1, a2)Alleles correction2 (a1, a2)CE
D1S1677(TTCC)1513, 141323, 110313, 14
D1S1656(CCTA)1(TCTA)1619, 182493, 53219, 1918.3, 18.3
TPOX(AATG)88, 74552, 1848, 88, 8
D2S441(TCTA)1210, 142134, 182510, 14
D2S1776(AGAT)1110, 95559, 32010, 1010, 10
D2S1338(GGAA)2(GGAC)1(GGAA)13(GGCA)723, 22752, 9523, 2319, 23
D3S1358(TCTA)1(TCTG)1(TCTA)1415, 143054, 296614, 15
D3S4529(GATA)4AATA(GATA)711, 102713, 12011, 1113, 13
D4S2408(ATCT)910, 9993, 7769, 10
FGA(GGAA)2GGAG(AAAG)14AGAAAAAA(GAAA)320, 21229, 12423, 24
D5S2800(GGTA)3(GACA)8(GATA)3(GATT)314, 131615, 6614, 1414, 23
D5S818(ATCT)1111, 103734, 42611, 1111, 11
CSF1PO(ATCT)1410, 122442, 199610, 12
D6S1043(ATCT)1212, 183563, 256712, 18
D6S474(AGAT)5(GATA)1214, 183063, 205213, 17
D7S820(TATC)1310, 111544, 55410, 1010, 11
D8S1179(TCTA)1(TCTG)1(TCTA)1113, 122665, 27513, 1313, 13
D10S1248(GGAA)1315, 131327, 105713, 15
THO1(AATG)7ATG(AATG)09, 93298, 1229, 98, 9.3
vWA(TAGA)11(CAGA)5TAGANA0, 017, 18
D12S391(AGAT)11(AGAC)7AGATNA0, 018, 20
D12ATA63(TTG)3(TTA)1012, 113478, 41712, 1213, 13
D13S317(TATC)1111, 103516, 19611, 1111, 11
D14S1434(CTGT)3(CTAT)1011, 132236, 167911, 13
Penta E(TCTTT)513, 12629, 62412, 13
D16S539(GATA)1111, 124105, 308511, 12
D18S51(AGAA)1815, 191300, 93415, 19
D19S433(CCTT)12cctaCCTTctttCCTTNA0, 014, 15
D21S11(TCTA)4(TCTG)6(TCTA)3ta(TCTA)3tca(TCTA)2tccata(TCTA)1130, 292833, 30130, 3030, 30
Penta D(AAAGA)1312, 1353, 112, 1212, 12
D22S1045(ATT)14ACT(ATT)210, 132109, 139011, 14
  1. 1Reference sequence repeat region sequence structure based on the latest forensic STR sequence guide with modifications to meet requirements of STRScan
  2. 2Alleles correction according to the stutter ratio, which is 0.5 in this study. ‘-’, not applicable