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Table 1 Transcriptome Sequence data quality for the Jerusalem artichoke

From: Characterization of the Tibet plateau Jerusalem artichoke (Helianthus tuberosus L.) transcriptome by de novo assembly to discover genes associated with fructan synthesis and SSR analysis

Raw reads

Clean reads

Clean bases

Q20(%)a

Q30(%)b

GC(%)

124,500,360

123,169,632

18.68G

98.28%

95.40%

44.92%

  1. aQ20: percentage is the proportion of nucleotides with a quality > 20 in reads
  2. bQ30: percentage is the proportion of nucleotides with a quality > 30 in reads