Table 2 The16 hub genes identified by MCODE (ranked by degree)
From: Bladder cancer stage-associated hub genes revealed by WGCNA co-expression network analysis
Gene Name | Degree | Neighborhood Connectivity | Average Shortest Path Length | Closeness Centrality | Clustering Coefficient | Stress | Topological Coefficient |
|---|---|---|---|---|---|---|---|
CDH11 | 49 | 6.244898 | 1.27941176 | 0.7816092 | 0.089286 | 4554 | 0.115646 |
COL3A1 | 35 | 8.971429 | 1.5 | 0.66666667 | 0.191597 | 2022 | 0.133902 |
COL6A3 | 31 | 9.16129 | 1.55882353 | 0.64150943 | 0.197849 | 1944 | 0.141633 |
COL5A1 | 25 | 10.72 | 1.66176471 | 0.60176991 | 0.266667 | 1420 | 0.16625 |
AEBP1 | 21 | 12.61905 | 1.70588235 | 0.5862069 | 0.347619 | 852 | 0.190476 |
COL1A2 | 19 | 14 | 1.75 | 0.57142857 | 0.432749 | 464 | 0.212121 |
NTM | 11 | 19.81818 | 1.85294118 | 0.53968254 | 0.418182 | 544 | 0.295794 |
COL11A1 | 10 | 20.7 | 1.86764706 | 0.53543307 | 0.511111 | 388 | 0.312121 |
THBS2 | 10 | 21.6 | 1.86764706 | 0.53543307 | 0.488889 | 432 | 0.322388 |
COL8A1 | 10 | 21.6 | 1.86764706 | 0.53543307 | 0.488889 | 432 | 0.322388 |
COL1A1 | 9 | 21.55556 | 1.91176471 | 0.52307692 | 0.694444 | 194 | 0.331624 |
BGN | 8 | 24.5 | 1.92647059 | 0.51908397 | 0.964286 | 2 | 0.376923 |
MMP2 | 7 | 26.85714 | 1.94117647 | 0.51515152 | 1 | 0 | 0.413187 |
PXDN | 6 | 30 | 1.95588235 | 0.5112782 | 1 | 0 | 0.461538 |
THY1 | 6 | 30 | 1.95588235 | 0.5112782 | 1 | 0 | 0.461538 |
TGFB1I1 | 6 | 30 | 1.95588235 | 0.5112782 | 1 | 0 | 0.461538 |