Item | Number |
---|---|
1. Raw sequences and Assembly statistics | |
Total reads | 66,668,192 |
Total nucleotides (bp) | 10,000,228,800 |
GC content percentage | 46.77% |
Total unigenes (average length; N50; min-max length) | 42,135 (988; 1714; 201–15,555) |
Mean RPKM value of unigenes (min-mix RPKM value) | 14.8 (0–7109) |
2. Bioinformatics annotations of mango fruit unigenes | |
Gene annotation against Nr (%) | 29,315 (69.6) |
Gene annotation against Swiss-Prot (%) | 20,642 (49.0) |
Gene annotation against KEGG (%) | 11,055 (26.2) |
Gene annotation against KOG (%) | 16,794 (39.9) |
All annotation genes (%) | 29,464 (69.9) |
Without annotation genes (%) | 12,671 (30.1) |
GO Ontology (%) | |
Biological process category | 51,202; |
Cellular component category | 24,483; |
Molecular function category | 37,133; |