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Table 1 Genetic variants in the two IBD segments

From: Identity-by-descent refines mapping of candidate regions for preaxial polydactyly II /III in a large Chinese pedigree

Gene(7q36))

Position (GRCH37.p13)

SNP ID

REF

ALT

P-valve

Note

LMBR1 156470537...156685902

156354434

rs1860156

T

C

1.00E-06

116 kb upstream of LMBR1

156401455

kgp6282999

C

A

1.00E-06

69 kb upstream of LMBR1

156477347

kgp13575466

C

A

1.00E-06

 

156497668

rs10228997

A

G

1.00E-06

 

156526645

rs10224728

T

G

1.00E-06

 

156686101

kgp6457815

C

T

1.00E-06

199 bp downstream of LMBR1

156687282

kgp1716770

C

T

1.00E-06

1 kb downstream of LMBR1

156716316

kgp3747986

T

C

1.00E-06

30 kb downstream of LMBR1

156730688

kgp7566181

T

C

1.00E-06

45 kb downstream of LMBR1

SHH 155595558...155604967

155103781

rs13223383

G

T

1.00E-06

492 kb upstream of SHH

155,169,143

rs1990808

C

T

1.00E-06

426 kb upstream of SHH

155,182,442

kgp9710825

G

A

1.00E-06

426 kb upstream of SHH

155716520

rs4716928

C

T

1.00E-06

112 kb downstream of SHH

155718241

rs4716930

A

C

1.00E-06

113 kb downstream of SHH

155721324

rs11764820

A

G

1.00E-06

116 kb downstream of SHH

155721386

rs11769663

G

T

1.00E-06

116 kb downstream of SHH

155722231

rs6971588

T

G

1.00E-06

117 kb downstream of SHH

155723112

kgp11597900

C

T

1.00E-06

118 kb downstream of SHH