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Table 7 Haplotype Analysis for CACNA1I Gene in SCZ

From: Genetic risk between the CACNA1I gene and schizophrenia in Chinese Uygur population

Blocks with D’ > 0.95

Haplotype

Case(freq)

Control(freq)

Chi 2

OR [95% CI]

P-value

P-FDR

rs132575-rs713860

A-C

1107(0.563)

1393(0.575)

0.435

0.96 [0.851 ~ 1.082]

0.52

0.509

A-T

187(0.095)

281(0.116)

4.788

0.804 [0.661 ~ 0.977]

0.03

0.038

G-C

672(0.341)

745(0.307)

6.216

1.175 [1.035 ~ 1.334]

0.013

0.025

rs713860-rs738168

C-C

1762(0.896)

2112(0.87)

7.714

1.299 [1.079 ~ 1.564]

0.006

0.007

T-A

187(0.095)

283(0.116)

5.161

0.797 [0.656 ~ 0.969]

0.023

0.023

rs713860-rs11705208

C-C

1588(0.807)

1913(0.788)

2.883

1.136 [0.98 ~ 1.317]

0.091

0.134

C-T

191(0.097)

229(0.094)

0.109

1.034 [0.845 ~ 1.266]

0.757

0.757

T-C

187(0.095)

284(0.117)

5.352

0.794 [0.653 ~ 0.965]

0.021

0.062

rs11705208-rs5750871

C-G

745(0.379)

1000(0.417)

4.761

0.873 [0.773 ~ 0.986]

0.03

0.038

T-A

191(0.097)

225(0.093)

0.268

1.055 [0.861 ~ 1.292]

0.604

0.604

C-A

1027(0.522)

1172(0.488)

7.041

1.174 [1.042 ~ 1.322]

0.008

0.015

  1. Italics represent P-values < 0.05