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Table 4 Allele and genotype frequencies of 9 Loci in SCZ

From: Genetic risk between the CACNA1I gene and schizophrenia in Chinese Uygur population

SNP ID Alleles   OR [95% CI] P-value P-FDR Genotypes    P-value P-FDR
rs9607658 T(freq) C(freq)     T/T(freq) T/C(freq) C/C(freq)   
 Case 618(0.314) 1350(0.685) 1.101 [0.968 ~ 1.253] 0.142 0.178 94(0.095) 430(0.436) 460(0.467) 0.218 0.245
 Control 711(0.293) 1711(0.706)     111(0.091) 489(0.403) 611(0.504)   
rs132567 A(freq) G(freq)     A/A(freq) A/G(freq) G/G(freq)   
 Case 1073(0.545) 895(0.454) 0.917 [0.814 ~ 1.034] 0.159 0.178 284(0.288) 505(0.513) 195(0.198) 0.054 0.084
 Control 1271(0.523) 1155(0.476)     348(0.286) 575(0.474) 290(0.239)   
rs132575 A(freq) G(freq)     A/A(freq) A/G(freq) G/G(freq)   
 Case 1295(0.658) 673(0.341) 1.159 [1.021 ~ 1.316] 0.021 0.039 414(0.42) 467(0.474) 103(0.104) 0.008 0.037
 Control 1674(0.69) 750(0.309)     587(0.484) 500(0.412) 125(0.103)   
rs713860 C(freq) T(freq)     C/C(freq) C/T(freq) T/T(freq)   
 Case 1779(0.904) 187(0.095) 0.792 [0.652 ~ 0.963] 0.019 0.039 808(0.821) 163(0.165) 12(0.012) 0.056 0.084
 Control 2142(0.882) 284(0.117)     947(0.78) 248(0.204) 18(0.014)   
rs738168 C(freq) A(freq)     C/C(freq) C/A(freq) A/A(freq)   
 Case 1763(0.895) 205(0.104) 0.785 [0.651 ~ 0.947] 0.011 0.039 792(0.804) 179(0.181) 13(0.013) 0.03 0.084
 Control 2115(0.871) 313(0.128)     920(0.757) 275(0.226) 19(0.015)   
rs136805 C(freq) T(freq)     C/C(freq) C/T(freq) T/T(freq)   
 Case 1001(0.509) 965(0.49) 1.212 [1.075 ~ 1.365] 0.001 0.014 253(0.257) 495(0.503) 235(0.239) 0.006 0.037
 Control 1339(0.556) 1065(0.443)     378(0.314) 583(0.485) 241(0.2)   
rs11705208 C(freq) T(freq)     C/C(freq) C/T(freq) T/T(freq)   
 Case 1775(0.901) 193(0.098) 1.039 [0.849 ~ 1.27] 0.708 0.708 803(0.816) 169(0.171) 12(0.012) 0.771 0.771
 Control 2198(0.905) 230(0.094)     995(0.819) 208(0.171) 11(0.009)   
rs5757760 T(freq) C(freq)     T/T(freq) T/C(freq) C/C(freq)   
 case 766(0.389) 1200(0.61) 0.873 [0.773 ~ 0.985] 0.028 0.042 149(0.151) 468(0.476) 366(0.372) 0.09 0.116
 control 1017(0.422) 1391(0.577)     216(0.179) 585(0.485) 403(0.334)   
rs5750871 G(freq) A(freq)     G/G(freq) G/A(freq) A/A(freq)   
 case 748(0.38) 1218(0.619) 0.859 [0.76 ~ 0.97] 0.014 0.039 150(0.152) 448(0.455) 385(0.391) 0.051 0.084
 control 1003(0.416) 1403(0.583)     215(0.178) 573(0.476) 415(0.344)   
  1. Italics represent P-values < 0.05