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Table 3 The clean reads mapped to the reference genome

From: Transcriptome analysis of genes involved in anthocyanins biosynthesis and transport in berries of black and white spine grapes (Vitis davidii)

Sample name Total reads Total mapped Multiple mapped Uniquely mapped Reads map to ‘ + ’ Reads map to ‘-’ Non-splice reads Splice reads
B1A 54944048 40808925 (74.27%) 794409 (1.45%) 40014516 (72.83%) 20002451 (36.41%) 20012065 (36.42%) 24600401 (44.77%) 15414115 (28.05%)
B1B 56945838 42479460 (74.6%) 859482 (1.51%) 41619978 (73.09%) 20805711 (36.54%) 20814267 (36.55%) 25634857 (45.02%) 15985121 (28.07%)
B2A 58763160 37649622 (64.07%) 748838 (1.27%) 36900784 (62.8%) 18441742 (31.38%) 18459042 (31.41%) 23233578 (39.54%) 13667206 (23.26%)
B2B 55118356 36141693 (65.57%) 728542 (1.32%) 35413151 (64.25%) 17717304 (32.14%) 17695847 (32.11%) 22963769 (41.66%) 12449382 (22.59%)
B3A 54572136 36055433 (66.07%) 800693 (1.47%) 35254740 (64.6%) 17628599 (32.3%) 17626141 (32.3%) 22458722 (41.15%) 12796018 (23.45%)
B3B 60249422 40232538 (66.78%) 961911 (1.6%) 39270627 (65.18%) 19632707 (32.59%) 19637920 (32.59%) 24890373 (41.31%) 14380254 (23.87%)
W1A 56521424 43356467 (76.71%) 856353 (1.52%) 42500114 (75.19%) 21230181 (37.56%) 21269933 (37.63%) 26214684 (46.38%) 16285430 (28.81%)
W1B 49850444 38208017 (76.65%) 751623 (1.51%) 37456394 (75.14%) 18713704 (37.54%) 18742690 (37.6%) 22835496 (45.81%) 14620898 (29.33%)
W2A 59192440 44324521 (74.88%) 750136 (1.27%) 43574385 (73.61%) 21759103 (36.76%) 21815282 (36.85%) 26852753 (45.37%) 16721632 (28.25%)
W2B 59500464 45258909 (76.06%) 808909 (1.36%) 44450000 (74.71%) 22202737 (37.32%) 22247263 (37.39%) 27353360 (45.97%) 17096640 (28.73%)
W3A 61521590 39182938 (63.69%) 793374 (1.29%) 38389564 (62.4%) 19130918 (31.1%) 19258646 (31.3%) 24966612 (40.58%) 13422952 (21.82%)
W3B 62332092 42273326 (67.82%) 830849 (1.33%) 41442477 (66.49%) 20661523 (33.15%) 20780954 (33.34%) 26550475 (42.6%) 14892002 (23.89%)