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Table 3 The clean reads mapped to the reference genome

From: Transcriptome analysis of genes involved in anthocyanins biosynthesis and transport in berries of black and white spine grapes (Vitis davidii)

Sample name

Total reads

Total mapped

Multiple mapped

Uniquely mapped

Reads map to ‘ + ’

Reads map to ‘-’

Non-splice reads

Splice reads

B1A

54944048

40808925 (74.27%)

794409 (1.45%)

40014516 (72.83%)

20002451 (36.41%)

20012065 (36.42%)

24600401 (44.77%)

15414115 (28.05%)

B1B

56945838

42479460 (74.6%)

859482 (1.51%)

41619978 (73.09%)

20805711 (36.54%)

20814267 (36.55%)

25634857 (45.02%)

15985121 (28.07%)

B2A

58763160

37649622 (64.07%)

748838 (1.27%)

36900784 (62.8%)

18441742 (31.38%)

18459042 (31.41%)

23233578 (39.54%)

13667206 (23.26%)

B2B

55118356

36141693 (65.57%)

728542 (1.32%)

35413151 (64.25%)

17717304 (32.14%)

17695847 (32.11%)

22963769 (41.66%)

12449382 (22.59%)

B3A

54572136

36055433 (66.07%)

800693 (1.47%)

35254740 (64.6%)

17628599 (32.3%)

17626141 (32.3%)

22458722 (41.15%)

12796018 (23.45%)

B3B

60249422

40232538 (66.78%)

961911 (1.6%)

39270627 (65.18%)

19632707 (32.59%)

19637920 (32.59%)

24890373 (41.31%)

14380254 (23.87%)

W1A

56521424

43356467 (76.71%)

856353 (1.52%)

42500114 (75.19%)

21230181 (37.56%)

21269933 (37.63%)

26214684 (46.38%)

16285430 (28.81%)

W1B

49850444

38208017 (76.65%)

751623 (1.51%)

37456394 (75.14%)

18713704 (37.54%)

18742690 (37.6%)

22835496 (45.81%)

14620898 (29.33%)

W2A

59192440

44324521 (74.88%)

750136 (1.27%)

43574385 (73.61%)

21759103 (36.76%)

21815282 (36.85%)

26852753 (45.37%)

16721632 (28.25%)

W2B

59500464

45258909 (76.06%)

808909 (1.36%)

44450000 (74.71%)

22202737 (37.32%)

22247263 (37.39%)

27353360 (45.97%)

17096640 (28.73%)

W3A

61521590

39182938 (63.69%)

793374 (1.29%)

38389564 (62.4%)

19130918 (31.1%)

19258646 (31.3%)

24966612 (40.58%)

13422952 (21.82%)

W3B

62332092

42273326 (67.82%)

830849 (1.33%)

41442477 (66.49%)

20661523 (33.15%)

20780954 (33.34%)

26550475 (42.6%)

14892002 (23.89%)