Transcriptome analysis of genes involved in anthocyanins biosynthesis and transport in berries of black and white spine grapes (Vitis davidii)

Table 2 Summary of the sequencing data

Sample name	Raw reads	Clean reads	Clean bases	Error rate(%)	Q20(%)	Q30(%)	GC content(%)
B1A	56801854	54944048	6.86G	0.03	96.90	93.75	46.02
B1B	58642586	56945838	7.12G	0.03	97.00	93.94	45.84
B2A	60467584	58763160	7.34G	0.03	96.4	92.73	46.45
B2B	57458296	55118356	6.88G	0.03	96.23	92.42	47.42
B3A	56058442	54572136	6.82G	0.03	96.25	92.43	46.49
B3B	62161910	60249422	7.54G	0.03	96.32	92.57	46.41
W1A	58127846	56521424	7.06G	0.03	96.30	92.47	46.14
W1B	50809432	49850444	6.24G	0.03	96.40	92.59	46.59
W2A	60765156	59192440	7.40G	0.03	96.47	92.84	46.10
W2B	61258710	59500464	7.44G	0.03	96.54	92.96	46.53
W3A	64217138	61521590	7.70G	0.03	96.19	92.28	47.07
W3B	64263360	62332092	7.80G	0.03	96.23	92.35	46.76

A and B: two biological replicates of each stages; Raw reads: the original number of reads by sequencing; Clean reads: the number of reads after removing the low-quality reads and trimming the adapter sequences from raw reads; Clean bases: number of clean reads multiplied by length of clean reads. Error rate: the average base sequencing error rates; Q20 and Q30: Phred score, refer to the accuracy of sequenced bases were 99 and 99.9%; GC content: the percentage of G and C in total bases

ISSN: 1601-5223