Table 3 Comparison of diversity measures of REMAP and SSR markers in the analysis of 51 timothy accessions
From: Assessment of genetic diversity in Nordic timothy (Phleum pratense L.)
REMAP | SSR | |
|---|---|---|
No. of primer combinations or loci | 4 | 13 |
Total no. of markers | 533 | 464 |
No. of markers per primer combination or locus = EMF1 | 133.3 | 35.7 |
PIC, average | 0.131 | 0.086 |
Markers with PIC > 0.1 | 258 = 48 % | 148 = 32 % |
Markers with MAF < 0.1 | 365 = 68 % | 371 = 80 % |
Average gene diversity | 0.152 | 0.098 |
Marker index (MI) = EMF x PIC | 17.4 | 3.1 |